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  1. Malaria parasite detection and cell counting for human and mouse using thin blood smear microscopy

    Article • Journal of Medical Imaging, December 2018, SPIE

    Ilker Ersoy

  2. Understanding the learned behavior of customized convolutional neural networks toward malaria parasite detection in thin blood smear images

    Article • Journal of Medical Imaging, July 2018, SPIE

    Ilker Ersoy

  3. Deep learning approaches in electron microscopy imaging for mitochondria segmentation

    Article • International Journal of Data Mining and Bioinformatics, January 2018, Inderscience Publishers

    Ilker Ersoy

  4. Mitochondria segmentation in electron microscopy volumes using deep convolutional neural network

    Article • November 2017, Institute of Electrical & Electronics Engineers (IEEE)

    Ilker Ersoy

  5. Integrating segmentation with deep learning for enhanced classification of epithelial and stromal tissues in H&E images

    Article • Pattern Recognition Letters, September 2017, Elsevier

    Ilker Ersoy

  6. Nucleus Classification in Colon Cancer H&E Images using Deep Learning

    Article • Microscopy and Microanalysis, July 2017, Cambridge University Press

    Ilker Ersoy

  7. Eye Gaze Pattern Analysis of Whole Slide Image Viewing Behavior in PathEdEx Platform

    Article • Microscopy and Microanalysis, July 2017, Cambridge University Press

    Ilker Ersoy

  8. Accuracy and Reproducibility of Nuclear/Cytoplasmic Ratio Assessments in Urinary Cytology Specimens

    Article • Diagnostic Cytopathology, January 2017, Wiley

    Ilker Ersoy

  9. PathEdEx – Uncovering high-explanatory visual diagnostics heuristics using digital pathology and multiscale gaze data

    Article • Journal of Pathology Informatics, January 2017, Medknow

    Ilker Ersoy

  10. CNN-based image analysis for malaria diagnosis

    Article • December 2016, Institute of Electrical & Electronics Engineers (IEEE)

    Ilker Ersoy, Professor Richard James Maude

  11. Peroxiredoxin 6 (Prdx6) supports NADPH oxidase1 (Nox1)-based superoxide generation and cell migration

    Article • Free Radical Biology and Medicine, July 2016, Elsevier

    Ilker Ersoy

  12. A Scalable Architecture for Operational FMV Exploitation

    Article • December 2015, Institute of Electrical & Electronics Engineers (IEEE)

    Ilker Ersoy

  13. A segmentation-based multi-scale framework for the classification of epithelial and stromal tissues in H&E images

    Article • November 2015, Institute of Electrical & Electronics Engineers (IEEE)

    Ilker Ersoy

  14. Vasoactive agonists exert dynamic and coordinated effects on vascular smooth muscle cell elasticity, cytoskeletal remodelling and adhesion

    Article • The Journal of Physiology, March 2014, Wiley

    Gerald Meininger, Ilker Ersoy

  15. Influence of membrane cholesterol and substrate elasticity on endothelial cell spreading behavior

    Article • Journal of Biomedical Materials Research Part A, December 2012, Wiley

    Ilker Ersoy

  16. Coupled edge profile active contours for red blood cell flow analysis

    Article • May 2012, Institute of Electrical & Electronics Engineers (IEEE)

    Ilker Ersoy

  17. Interactive target tracking for persistent wide-area surveillance

    Article • May 2012, SPIE

    Ilker Ersoy

  18. Tracking in persistent wide-area motion imagery

    Article • January 2011, SPIE

    Ilker Ersoy

  19. Segmentation and Classification of Cell Cycle Phases in Fluorescence Imaging

    Article • January 2009, Springer Science + Business Media

    Ilker Ersoy

  20. Tracking cells in Life Cell Imaging videos using topological alignments

    Article • Algorithms for Molecular Biology, January 2009, Springer Science + Business Media

    Ilker Ersoy

  21. Multi-feature contour evolution for automatic live cell segmentation in time lapse imagery

    Article • August 2008, Institute of Electrical & Electronics Engineers (IEEE)

    Ilker Ersoy

  22. Cell segmentation using Hessian-based detection and contour evolution with directional derivatives

    Article • January 2008, Institute of Electrical & Electronics Engineers (IEEE)

    Ilker Ersoy

  23. Cell Spreading Analysis with Directed Edge Profile-Guided Level Set Active Contours

    Article • January 2008, Springer Science + Business Media

    Ilker Ersoy

  24. Shadow Detection by Combined Photometric Invariants for Improved Foreground Segmentation

    Article • January 2005, Institute of Electrical & Electronics Engineers (IEEE)

    Ilker Ersoy

  25. A multi-hypothesis approach for salient object tracking in visual surveillance

    Article • January 2005, Institute of Electrical & Electronics Engineers (IEEE)

    Ilker Ersoy

  26. A framework for trajectory based visual event retrieval

    Article • January 2004, Institute of Electrical & Electronics Engineers (IEEE)

    Ilker Ersoy

  27. Performance evaluation of block-based motion estimation algorithms and distortion measures

    Article • January 2004, Institute of Electrical & Electronics Engineers (IEEE)

    Ilker Ersoy

  28. Moving Object Segmentation Using the Flux Tensor for Biological Video Microscopy

    Article • Springer Science + Business Media

    Ilker Ersoy