All Stories

  1. Predicting Enantioselectivity of Ruthenium-Catalyzed Ketone Hydrogenation with 3D Structure-Based Deep Learning

    Article • Journal of the American Chemical Society, July 2026, American Chemical Society (ACS)

    Gunther Weber

  2. Scalable Computation of Topological Abstractions for Scalar Data

    Article • Computer Graphics Forum, June 2026, Wiley

    Gunther Weber

  3. Accurately fitting biophysical neuron models to experimental voltage data enabled by meta-learning

    Article • June 2026, Springer Science + Business Media

    Gunther Weber

  4. Extremely Scalable Distributed Computation of Contour Trees via Pre-Simplification

    Article • November 2025, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  5. LossLens: Diagnostics for Machine Learning Through Loss Landscape Visual Analytics

    Article • IEEE Computer Graphics and Applications, March 2025, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  6. Distributed Augmentation, Hypersweeps, and Branch Decomposition of Contour Trees for Scientific Exploration

    Article • IEEE Transactions on Visualization and Computer Graphics, January 2025, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  7. Enhancing Electron Microscopy Image Classification Using Data Augmentation

    Article • November 2024, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  8. IEEE LDAV 2024 Preface

    Article • October 2024, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  9. The ECP ALPINE project: In situ and post hoc visualization infrastructure and analysis capabilities for exascale

    Article • The International Journal of High Performance Computing Applications, October 2024, SAGE Publications

    Gunther Weber

  10. Extensions to the SENSEI In situ Framework for Heterogeneous Architectures

    Article • November 2023, ACM (Association for Computing Machinery)

    Gunther Weber

  11. Preface IEEE LDAV 2023

    Article • October 2023, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  12. ExTreeM: Scalable Augmented Merge Tree Computation via Extremum Graphs

    Article • IEEE Transactions on Visualization and Computer Graphics, January 2023, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  13. A multi-modal scanning system to digitize CBRNE emergency response scenes

    Article • November 2022, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  14. Distributed Hierarchical Contour Trees

    Article • October 2022, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  15. Netostat: analyzing dynamic flow patterns in high-speed networks

    Article • Cluster Computing, March 2022, Springer Science + Business Media

    Gunther Weber

  16. Proximity Portability and in Transit, M-to-N Data Partitioning and Movement in SENSEI

    Article • January 2022, Springer Science + Business Media

    Gunther Weber

  17. The SENSEI Generic In Situ Interface: Tool and Processing Portability at Scale

    Article • January 2022, Springer Science + Business Media

    Gunther Weber

  18. Deep Learning Segmentation of Complex Features in Atomic-Resolution Phase-Contrast Transmission Electron Microscopy Images

    Article • Microscopy and Microanalysis, June 2021, Cambridge University Press

    Gunther Weber

  19. Scalable Contour Tree Computation by Data Parallel Peak Pruning

    Article • IEEE Transactions on Visualization and Computer Graphics, April 2021, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  20. Optimization and Augmentation for Data Parallel Contour Trees

    Article • IEEE Transactions on Visualization and Computer Graphics, January 2021, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  21. Distributed Task-Parallel Topology-Controlled Volume Rendering

    Article • January 2021, Springer Science + Business Media

    Gunther Weber

  22. Data Parallel Hypersweeps for in Situ Topological Analysis

    Article • October 2020, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  23. A terminology for in situ visualization and analysis systems

    Article • The International Journal of High Performance Computing Applications, August 2020, SAGE Publications

    Gunther Weber

  24. Fuzzy Contour Trees: Alignment and Joint Layout of Multiple Contour Trees

    Article • Computer Graphics Forum, June 2020, Wiley

    Gunther Weber

  25. Pathological and Test Cases for Reeb Analysis

    Article • January 2020, Springer Science + Business Media

    Gunther Weber

  26. Dynamic Nested Tracking Graphs

    Article • IEEE Transactions on Visualization and Computer Graphics, January 2020, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  27. State-based network similarity visualization

    Article • Information Visualization, November 2019, SAGE Publications

    Sugeerth Murugesan, Gunther Weber

  28. Preface

    Article • Catalysis Today, March 2019, Elsevier

    Gunther Weber, Professor Benjaram Mahipal Reddy

  29. Preface

    Article • IEEE Transactions on Visualization and Computer Graphics, January 2019, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  30. ScienceSearch: Enabling Search through Automatic Metadata Generation

    Article • October 2018, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  31. Hierarchical Correlation Clustering in Multiple 2D Scalar Fields

    Article • Computer Graphics Forum, June 2018, Wiley

    Gunther Weber

  32. Measuring the Error in Approximating the Sub-Level Set Topology of Sampled Scalar Data

    Article • International Journal of Computational Geometry & Applications, March 2018, World Scientific Pub Co Pte Lt

    Gunther Weber

  33. Web-based visual data exploration for improved radiological source detection

    Article • Concurrency and Computation Practice and Experience, July 2017, Wiley

    Gunther Weber

  34. Brain Modulyzer: Interactive Visual Analysis of Functional Brain Connectivity

    Article • IEEE/ACM Transactions on Computational Biology and Bioinformatics, July 2017, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  35. Multi-scale visual analysis of time-varying electrocorticography data via clustering of brain regions

    Article • BMC Bioinformatics, June 2017, Springer Science + Business Media

    Gunther Weber

  36. Nested Tracking Graphs

    Article • Computer Graphics Forum, June 2017, Wiley

    Gunther Weber

  37. Apply or Die: On the Role and Assessment of Application Papers in Visualization

    Article • IEEE Computer Graphics and Applications, May 2017, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  38. Computing and Visualizing Time-Varying Merge Trees for High-Dimensional Data

    Article • January 2017, Springer Science + Business Media

    Gunther Weber

  39. Scientific Workflows at DataWarp-Speed: Accelerated Data-Intensive Science Using NERSC's Burst Buffer

    Article • November 2016, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  40. Performance Analysis, Design Considerations, and Applications of Extreme-Scale In Situ Infrastructures

    Article • November 2016, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  41. Hierarchical Spatio-temporal Visual Analysis of Cluster Evolution in Electrocorticography Data

    Article • October 2016, ACM (Association for Computing Machinery)

    Gunther Weber

  42. Parallel peak pruning for scalable SMP contour tree computation

    Article • October 2016, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  43. In situ and in-transit analysis of cosmological simulations

    Article • Computational Astrophysics and Cosmology, August 2016, Springer Science + Business Media

    Gunther Weber

  44. Advances in Visual Computing

    Article • January 2015, Springer Science + Business Media

    Gunther Weber

  45. A Topology-Based Approach to Visualize the Thematic Composition of Document Collections

    Article • January 2014, Springer Science + Business Media

    Gunther Weber

  46. Distributed Contour Trees

    Article • January 2014, Springer Science + Business Media

    Gunther Weber

  47. Interactive Visual Exploration and Analysis

    Article • January 2014, Springer Science + Business Media

    Gunther Weber

  48. Measuring the Distance Between Merge Trees

    Article • January 2014, Springer Science + Business Media

    Gunther Weber

  49. Thermal-hydraulic–iodine chemistry coupling: Insights gained from the SARNET benchmark on the THAI experiments Iod-11 and Iod-12

    Article • Nuclear Engineering and Design, December 2013, Elsevier

    Prof. Sandro Paci, Gunther Weber

  50. Distributed merge trees

    Article • ACM SIGPLAN Notices, August 2013, ACM (Association for Computing Machinery)

    Gunther Weber

  51. Visualizing nD Point Clouds as Topological Landscape Profiles to Guide Local Data Analysis

    Article • IEEE Transactions on Visualization and Computer Graphics, March 2013, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  52. Distributed merge trees

    Article • January 2013, ACM (Association for Computing Machinery)

    Gunther Weber

  53. Augmented Topological Descriptors of Pore Networks for Material Science

    Article • IEEE Transactions on Visualization and Computer Graphics, December 2012, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  54. Efficient parallel extraction of crack-free isosurfaces from adaptive mesh refinement (AMR) data

    Article • October 2012, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  55. Linking Advanced Visualization and MATLAB for the Analysis of 3D Gene Expression Data

    Article • January 2012, Springer Science + Business Media

    Gunther Weber

  56. Geometry-preserving topological landscapes

    Article • January 2012, ACM (Association for Computing Machinery)

    Gunther Weber

  57. Topology exploration with hierarchical landscapes

    Article • January 2012, ACM (Association for Computing Machinery)

    Gunther Weber

  58. Topological Cacti: Visualizing Contour-Based Statistics

    Article • November 2011, Springer Science + Business Media

    Gunther Weber

  59. Visually Relating Gene Expression and in vivo DNA Binding Data

    Article • November 2011, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber, LESTER MACKEY

  60. Interactive Exploration and Analysis of Large-Scale Simulations Using Topology-Based Data Segmentation

    Article • IEEE Transactions on Visualization and Computer Graphics, September 2011, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  61. Topology-based Visualization of Transformation Pathways in Complex Chemical Systems

    Article • Computer Graphics Forum, June 2011, Wiley

    Gunther Weber

  62. An Application of Multivariate Statistical Analysis for Query-Driven Visualization

    Article • IEEE Transactions on Visualization and Computer Graphics, March 2011, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  63. Quantitative visualization of ChIP-chip data by using linked views

    Article • December 2010, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  64. Two-stage framework for a topology-based projection and visualization of classified document collections

    Article • October 2010, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  65. Feature Tracking Using Reeb Graphs

    Article • September 2010, Springer Science + Business Media

    Gunther Weber

  66. ASTEC, COCOSYS, and LIRIC Interpretation of the Iodine Behavior in the Large-Scale THAI Test Iod-9

    Article • Journal of Engineering for Gas Turbines and Power, August 2010, ASME International

    Gunther Weber

  67. Coupling visualization and data analysis for knowledge discovery from multi-dimensional scientific data

    Article • Procedia Computer Science, May 2010, Elsevier

    Gunther Weber

  68. Extreme Scaling of Production Visualization Software on Diverse Architectures

    Article • IEEE Computer Graphics and Applications, May 2010, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  69. Analyzing and Tracking Burning Structures in Lean Premixed Hydrogen Flames

    Article • IEEE Transactions on Visualization and Computer Graphics, March 2010, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  70. Automated Detection and Analysis of Particle Beams in Laser-Plasman Accelerator Simulations

    Article • February 2010, IntechOpen

    Gunther Weber

  71. Integrating Data Clustering and Visualization for the Analysis of 3D Gene Expression Data

    Article • IEEE/ACM Transactions on Computational Biology and Bioinformatics, January 2010, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  72. A Topological Framework for the Interactive Exploration of Large Scale Turbulent Combustion

    Article • December 2009, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  73. Automatic beam path analysis of laser wakefield particle acceleration data

    Article • Computational Science & Discovery, November 2009, Institute of Physics Publishing

    Gunther Weber

  74. FastBit: interactively searching massive data

    Article • Journal of Physics Conference Series, July 2009, Institute of Physics Publishing

    Alex Sim, Gunther Weber

  75. Occam's razor and petascale visual data analysis

    Article • Journal of Physics Conference Series, July 2009, Institute of Physics Publishing

    Gunther Weber

  76. Visual Exploration of Three-Dimensional Gene Expression Using Physical Views and Linked Abstract Views

    Article • IEEE/ACM Transactions on Computational Biology and Bioinformatics, April 2009, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  77. TOPOLOGY-GUIDED TESSELLATION OF QUADRATIC ElEMENTS

    Article • International Journal of Computational Geometry & Applications, April 2009, World Scientific Pub Co Pte Lt

    Gunther Weber

  78. Interactive Volume Rendering of Diffusion Tensor Data

    Article • January 2009, Springer Science + Business Media

    Gunther Weber

  79. Volume Visualization of Multiple Alignment of Large Genomic DNA

    Article • January 2009, Springer Science + Business Media

    Gunther Weber

  80. Scalable computation of streamlines on very large datasets

    Article • January 2009, ACM (Association for Computing Machinery)

    Gunther Weber

  81. High performance multivariate visual data exploration for extremely large data

    Article • November 2008, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  82. Visualization of Molecular Orbitals and the Related Electron Densities

    Article • Journal of Chemical Theory and Computation, April 2008, American Chemical Society (ACS)

    Gunther Weber

  83. A Quantitative Spatiotemporal Atlas of Gene Expression in the Drosophila Blastoderm

    Article • Cell, April 2008, Elsevier

    Gunther Weber

  84. Automated Analysis for Detecting Beams in Laser Wakefield Simulations

    Article • January 2008, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  85. Segmenting Gene Expression Patterns of Early-stage Drosophila Embryos

    Article • January 2008, Springer Science + Business Media

    Gunther Weber

  86. Topological Landscapes: A Terrain Metaphor for Scientific Data

    Article • IEEE Transactions on Visualization and Computer Graphics, November 2007, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  87. Differential response of lymphatic, venous and arterial endothelial cells to angiopoietin-1 and angiopoietin-2

    Article • BMC Cell Biology, March 2007, Springer Science + Business Media

    Gunther Weber

  88. Topology-Controlled Volume Rendering

    Article • IEEE Transactions on Visualization and Computer Graphics, March 2007, Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  89. TreeQ-VISTA: an interactive tree visualization tool with functional annotation query capabilities

    Article • Bioinformatics, January 2007, Oxford University Press (OUP)

    Gunther Weber

  90. Tessellation of Quadratic Elements

    Article • January 2006, Springer Science + Business Media

    Gunther Weber

  91. Article • Genome Biology, January 2006, Springer Science + Business Media

    Gunther Weber

  92. Article • Genome Biology, January 2006, Springer Science + Business Media

    Gunther Weber

  93. Visualization of experimental earthquake data

    Article • May 2003, SPIE

    Gunther Weber

  94. A Framework for Visualizing Hierarchical Computations

    Article • January 2003, Springer Science + Business Media

    Gunther Weber

  95. Extraction of Crack-free Isosurfaces from Adaptive Mesh Refinement Data

    Article • January 2003, Springer Science + Business Media

    Gunther Weber

  96. Visualization of adaptive mesh refinement data

    Article • May 2001, SPIE

    Gunther Weber

  97. Extraction of Crack-free Isosurfaces from Adaptive Mesh Refinement Data

    Article • January 2001, Springer Science + Business Media

    Gunther Weber

  98. Parallel cell projection rendering of adaptive mesh refinement data

    Article • Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  99. Exploring scalar fields using critical isovalues

    Article • Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber

  100. Construction of vector field hierarchies

    Article • Institute of Electrical & Electronics Engineers (IEEE)

    Gunther Weber