All Stories

  1. Single-cell RNA sequencing analysis with Bioconductor

    Article • F1000Research, July 2017, Faculty of 1000, Ltd.

    FANNY PERRAUDEAU, Davide Risso

  2. Normalizing single-cell RNA sequencing data: challenges and opportunities

    Article • Nature Chemical Biology, May 2017, Nature

    Davide Risso

  3. Slingshot: Cell lineage and pseudotime inference for single-cell transcriptomics

    Article • April 2017, Cold Spring Harbor Laboratory Press

    Davide Risso

  4. ZINB-WaVE: A general and flexible method for signal extraction from single-cell RNA-seq data

    Article • April 2017, Cold Spring Harbor Laboratory Press

    Davide Risso

  5. Normalization of RNA-seq data using factor analysis of control genes or samples

    Article • Nature Biotechnology, August 2014, Nature

    Davide Risso

  6. The Role of Spike-In Standards in the Normalization of RNA-seq

    Article • January 2014, Springer Science + Business Media

    Davide Risso

  7. A Hierarchical Bayesian Model for RNA-Seq Data

    Article • December 2012, Springer Science + Business Media

    Davide Risso

  8. A novel approach to the clustering of microarray data via nonparametric density estimation

    Article • BMC Bioinformatics, January 2011, Springer Science + Business Media

    Davide Risso

  9. GC-Content Normalization for RNA-Seq Data

    Article • BMC Bioinformatics, January 2011, Springer Science + Business Media

    Davide Risso

  10. A modified LOESS normalization applied to microRNA arrays: a comparative evaluation

    Article • Bioinformatics, July 2009, Oxford University Press (OUP)

    Davide Risso

  11. A-MADMAN: Annotation-based microarray data meta-analysis tool

    Article • BMC Bioinformatics, January 2009, Springer Science + Business Media

    Davide Risso

  12. A comparison on effects of normalisations in the detection of differentially expressed genes

    Article • BMC Bioinformatics, January 2009, Springer Science + Business Media

    Davide Risso