All Stories

  1. Environmental impact and biological removal processes of pharmaceutically active compounds: The particular case of sulfonamides, anticonvulsants and steroid estrogens
  2. Discrimination of Camellia japonica cultivars and chemometric models: An interlaboratory study
  3. Mapping Salmonella typhimurium pathways using 13C metabolic flux analysis
  4. Quantification of pharmaceutical compounds in wastewater samples by near infrared spectroscopy (NIR)
  5. New PLS analysis approach to wine volatile compounds characterization by near infrared spectroscopy (NIR)
  6. Reconstructing High-Quality Large-Scale Metabolic Models with merlin
  7. An Overview of the Evolution of Infrared Spectroscopy Applied to Bacterial Typing
  8. Erratum to: Quantitative physiology and elemental composition of Kluyveromyces lactis CBS 2359 during growth on glucose at different specific growth rates
  9. Quantitative physiology and elemental composition of Kluyveromyces lactis CBS 2359 during growth on glucose at different specific growth rates
  10. Monitoring biological wastewater treatment processes: recent advances in spectroscopy applications
  11. Simultaneous partial nitrification and 2-fluorophenol biodegradation with aerobic granular biomass: Reactor performance and microbial communities
  12. Quantitative image analysis of polyhydroxyalkanoates inclusions from microbial mixed cultures under different SBR operation strategies
  13. Genome-Wide Semi-Automated Annotation of Transporter Systems
  14. Exploiting intrinsic fluorescence spectroscopy to discriminate between Acinetobacter calcoaceticus–Acinetobacter baumannii complex species
  15. Online Analysis for Industrial Bioprocesses
  16. A Comparative Proteome Analysis of Escherichia coli ΔrelA Mutant Cells
  17. Estimation of effluent quality parameters from an activated sludge system using quantitative image analysis
  18. Discrimination of clinically relevant Candida species by Fourier-transform infrared spectroscopy with attenuated total reflectance (FTIR-ATR)
  19. Quantitative image analysis as a tool for Yarrowia lipolytica dimorphic growth evaluation in different culture media
  20. Economic analysis and environmental impact assessment of three different fermentation processes for fructooligosaccharides production
  21. Correction: Population Dynamics of a Salmonella Lytic Phage and Its Host: Implications of the Host Bacterial Growth Rate in Modelling
  22. Near-infrared spectroscopy for the detection and quantification of bacterial contaminations in pharmaceutical products
  23. Salmonella typhimuriumandEscherichia colidissimilarity: Closely related bacteria with distinct metabolic profiles
  24. Reconstructing genome-scale metabolic models with merlin
  25. Polyhydroxyalkanoate granules quantification in mixed microbial cultures using image analysis: Sudan Black B versus Nile Blue A staining
  26. Aroma production by Yarrowia lipolytica in airlift and stirred tank bioreactors: Differences in yeast metabolism and morphology
  27. Population Dynamics of a Salmonella Lytic Phage and Its Host: Implications of the Host Bacterial Growth Rate in Modelling
  28. What is the relationship between intracellular and extracellular metabolites? The theory of “metabolic overflow” put into test
  29. iOD907, the first genome-scale metabolic model for the milk yeastKluyveromyces lactis
  30. Optimization of fed-batch fermentation processes with bio-inspired algorithms
  31. Monitoring intracellular polyphosphate accumulation in enhanced biological phosphorus removal systems by quantitative image analysis
  32. Genome-wide metabolic re-annotation of Ashbya gossypii: new insights into its metabolism through a comparative analysis with Saccharomyces cerevisiae and Kluyveromyces lactis
  33. Image Analysis Technique as a Tool to Identify Morphological Changes in Trametes versicolor Pellets According to Exopolysaccharide or Laccase Production
  34. Activated sludge characterization through microscopy: A review on quantitative image analysis and chemometric techniques
  35. Quantitative image analysis for the characterization of microbial aggregates in biological wastewater treatment: a review
  36. Identification of Metabolic Engineering Targets through Analysis of Optimal and Sub-Optimal Routes
  37. Metabolic responses to recombinant bioprocesses in Escherichia coli
  38. Automatic identification of activated sludge disturbances and assessment of operational parameters
  39. Prediction of intracellular storage polymers using quantitative image analysis in enhanced biological phosphorus removal systems
  40. Molecular Aspects and Comparative Genomics of Bacteriophage Endolysins
  41. Image Analysis for Automatic Characterization of Polyhydroxyalcanoates Granules
  42. Genome scale metabolic network reconstruction of the pathogen Enterococcus faecalis
  43. Energy recovery and impact on land use of Maltese municipal solid waste incineration
  44. Influence of the RelA Activity on E. coli Metabolism by Metabolite Profiling of Glucose-Limited Chemostat Cultures
  45. Random sampling of elementary flux modes in large-scale metabolic networks
  46. Exploring the gap between dynamic and constraint-based models of metabolism
  47. Kinetic and stoichiometric characterization of a fixed biofilm reactor by pulse respirometry
  48. Genome-wide metabolic (re-) annotation of Kluyveromyces lactis
  49. Stringent response of Escherichia coli: revisiting the bibliome using literature mining
  50. Identification of minimal metabolic pathway models consistent with phenotypic data
  51. In situ pulse respirometric methods for the estimation of kinetic and stoichiometric parameters in aerobic microbial communities
  52. State and specific growth estimation in heterologous protein production by Pichia pastoris
  53. Identifying different types of bulking in an activated sludge system through quantitative image analysis
  54. Characterization of activated sludge abnormalities by image analysis and chemometric techniques
  55. Genomic and Proteomic Characterization of the Broad-Host-Range Salmonella Phage PVP-SE1: Creation of a New Phage Genus
  56. Critical perspective on the consequences of the limited availability of kinetic data in metabolic dynamic modelling
  57. Image analysis application for the study of activated sludge floc size during the treatment of synthetic and real fishery wastewaters
  58. Metabolic footprint analysis of recombinant Escherichia coli strains during fed-batch fermentations
  59. Modeling formalisms in Systems Biology
  60. Semantic annotation of biological concepts interplaying microbial cellular responses
  61. Interpreting the Regulatory Interplay in E. coli Metabolic Pathways
  62. A Systematic Modeling Approach to Elucidate the Triggering of the Stringent Response in Recombinant E. coli Systems
  63. 10th International Chemical and Biological Engineering Conference – CHEMPOR 2008 – Integrating Life Sciences & Engineering Special Section
  64. A chemometric tool to monitor high-rate anaerobic granular sludge reactors during load and toxic disturbances
  65. Challenges in integrating Escherichia coli molecular biology data
  66. Selection and Characterization of a Multivalent Salmonella Phage and Its Production in a Nonpathogenic Escherichia coli Strain
  67. Dilution and Magnification Effects on Image Analysis Applications in Activated Sludge Characterization
  68. Virtual laboratories in (bio)chemical engineering education
  69. Hybrid dynamic modeling of Escherichia coli central metabolic network combining Michaelis–Menten and approximate kinetic equations
  70. OptFlux: an open-source software platform for in silico metabolic engineering
  71. BioDR: Semantic indexing networks for biomedical document retrieval
  72. A Comparison between Bright Field and Phase-Contrast Image Analysis Techniques in Activated Sludge Morphological Characterization
  73. Applying a Metabolic Footprinting Approach to Characterize the Impact of the Recombinant Protein Production in Escherichia coli
  74. Selection of Elementary Modes for Bioprocess Control
  75. Merlin: Metabolic Models Reconstruction using Genome-Scale Information*
  76. Evaluating the integration of proteomic data for the prediction of intracellular fluxes after knockout experiments
  77. Application of image analysis to the prediction of EBC barley kernel weight distribution
  78. Comparison of adsorption equilibrium of fructose, glucose and sucrose on potassium gel-type and macroporous sodium ion-exchange resins
  79. Metabolic footprinting of Escherichia coli grown in fed-batch fermentation during recombinant protein production
  80. Quantitative monitoring of an activated sludge reactor using on-line UV-visible and near-infrared spectroscopy
  81. Morphology and physiology of anaerobic granular sludge exposed to an organic solvent
  82. @Note: A workbench for Biomedical Text Mining
  83. Galacto-oligosaccharides production during lactose hydrolysis by free Aspergillus oryzae β-galactosidase and immobilized on magnetic polysiloxane-polyvinyl alcohol
  84. Editorial: Special Issue Contributed by the 10th International Chemical and Biological Engineering Conference - CHEMPOR 2008
  85. Determination of Kinetic and Stoichiometric Parameters of Pseudomonas putida F1 by Chemostat and In Situ Pulse Respirometry
  86. Assessment of physiological conditions inE. colifermentations by epifluorescent microscopy and image analysis
  87. Correlation between sludge settling ability and image analysis information using partial least squares
  88. Bringing Text Miners and Biologists Closer Together
  89. Bringing Text Miners and Biologists Closer Together
  90. Air pollution control with semi-infinite programming
  91. Study of saline wastewater influence on activated sludge flocs through automated image analysis
  92. Principal component analysis and quantitative image analysis to predict effects of toxics in anaerobic granular sludge
  93. Inoculum type response to different pHs on biohydrogen production from l-arabinose, a component of hemicellulosic biopolymers
  94. Advanced monitoring of high-rate anaerobic reactors through quantitative image analysis of granular sludge and multivariate statistical analysis
  95. The 10th International Chemical and Biological Engineering Conference (CHEMPOR 2008)
  96. Evolutionary Approaches for Strain Optimization Using Dynamic Models under a Metabolic Engineering Perspective
  97. A Software Tool for the Simulation and Optimization of Dynamic Metabolic Models
  98. Modelling of Biotechnological Processes – An Approach Based on Artificial Neural Networks
  99. Computational Intelligence Techniques for Supervision and Diagnosis of Biological Wastewater Treatment Systems
  100. The use of antibiotics to improve phage detection and enumeration by the double-layer agar technique
  101. Biomedical Text Mining Applied to Document Retrieval and Semantic Indexing
  102. A Critical Review on Modelling Formalisms and Simulation Tools in Computational Biosystems
  103. Large Scale Dynamic Model Reconstruction for the Central Carbon Metabolism of Escherichia coli
  104. A Dynamical Model for the Fermentative Production of Fructooligosaccharides
  105. Natural computation meta-heuristics for the in silico optimization of microbial strains
  106. Evaluating evolutionary multiobjective algorithms for the in silico optimization of mutant strains
  107. A framework for the integrated analysis of metabolic and regulatory networks
  108. A framework for the development of Biomedical Text Mining software tools
  109. Monitoring of fed-batch E. coli fermentations with software sensors
  110. Monitoring of activated sludge settling ability through image analysis: validation on full-scale wastewater treatment plants
  111. Activated sludge process monitoring through in situ near-infrared spectral analysis
  112. Stalked protozoa identification by image analysis and multivariable statistical techniques
  113. Quantification of the CBD-FITC conjugates surface coating on cellulose fibres
  114. Kinetic and stoichiometric parameters estimation in a nitrifying bubble column through “in-situ” pulse respirometry
  115. Development of a Method Using Image Analysis for the Measurement of Cellulose-Binding Domains Adsorbed onto Cellulose Fibers
  116. Analysis of the effects of hyperbaric gases on S. cerevisiae cell cycle through a morphological approach
  117. Recognition of protozoa and metazoa using image analysis tools, discriminant analysis, neural networks and decision trees
  118. Exact Fuzzy Observer for a Baker's Yeast Fed-Batch Fermentation Process
  119. Development of an image analysis procedure for identifying protozoa and metazoa typical of activated sludge system
  120. Quantitative image analysis as a diagnostic tool for identifying structural changes during a revival process of anaerobic granular sludge
  121. Raw data pre-processing in the protozoa and metazoa identification by image analysis and multivariate statistical techniques
  122. Quantitative image analysis as a diagnostic tool for monitoring structural changes of anaerobic granular sludge during detergent shock loads
  123. Knowledge-based fuzzy system for diagnosis and control of an integrated biological wastewater treatment process
  124. Activated sludge monitoring of a wastewater treatment plant using image analysis and partial least squares regression
  125. Determination of diffusion coefficients of glycerol and glucose from starch based thermoplastic compounds on simulated physiological solution
  126. Assessment of yeast viability under hyperbaric conditions through a modeling approach
  127. Effect of hyperbaric stress on yeast morphology: study by automated image analysis
  128. Survey of Protozoa and Metazoa populations in wastewater treatment plants by image analysis and discriminant analysis
  129. Evolutionary Algorithms for Optimal Control in Fed-Batch Fermentation Processes
  130. Development of image analysis techniques as a tool to detect and quantify morphological changes in anaerobic sludge: II. Application to a granule deterioration process triggered by contact with oleic acid
  131. Development of image analysis techniques as a tool to detect and quantify morphological changes in anaerobic sludge: I. Application to a granulation process
  132. Automated image analysis to improve bead ingestion toxicity test counts in the protozoan Tetrahymena pyriformis
  133. Morphological analysis of Yarrowia lipolytica under stress conditions through image processing
  134. Estimation of multiple biomass growth rates and biomass concentration in a class of bioprocesses
  135. On-line simultaneous monitoring of glucose and acetate with FIA during high cell density fermentation of recombinant E. coli
  136. Stability, dynamics of convergence and tuning of observer-based kinetics estimators
  137. The study of protozoa population in wastewater treatment plants by image analysis
  138. Can spreadsheet solvers solve demanding optimization problems?
  139. Tuning of observer-based estimators: theory and application to the on-line estimation of kinetic parameters
  140. Staged and non-staged anaerobic filters: performance in relation to physical and biological characteristics of microbial aggregates
  141. Mass transfer properties of glucose and O2 in Saccharomyces cerevisiae flocs
  142. Modelling diffusion-reaction phenomena in yeast flocs of Saccharomyces cerevisiae
  143. Modelling diffusion-reaction phenomena in yeast flocs of
  144. A study on the convergence of observer-based kinetics estimators in stirred tank bioreactors
  145. Adaptive linearizing control of bioreactors
  146. Chapter 18 Dynamic Modelling of Complex Enzymatic Reactions
  147. NEW METHODOLOGIES FOR MULTIPHASE BIOREACTORS 2
  148. Evolutionary Algorithms for Static and Dynamic Optimization of Fed-batch Fermentation Processes
  149. Evaluating Simulated Annealing Algorithms in the Optimization of Bacterial Strains
  150. Evaluating Evolutionary Algorithms and Differential Evolution for the Online Optimization of Fermentation Processes
  151. Differential Evolution for the Offline and Online Optimization of Fed-Batch Fermentation Processes
  152. Data Integration Issues in the Reconstruction of the Genome-Scale Metabolic Model of Zymomonas Mobillis
  153. How Wastewater Processes can be Optimized Using LOQO